CDS

Accession Number TCMCG057C33196
gbkey CDS
Protein Id XP_018434232.1
Location join(19559837..19560127,19560204..19560298,19560406..19560547,19560634..19560725,19560821..19560917,19561028..19561103,19561202..19561322,19561404..19561520,19561616..19561683,19561831..19561928)
Gene LOC108806578
GeneID 108806578
Organism Raphanus sativus

Protein

Length 398aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018578730.1
Definition PREDICTED: SEC12-like protein 2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category U
Description Contains the following InterPro domains WD40 repeat-like-containing domain (InterPro IPR011046), WD40 repeat 2 (InterPro IPR019782), WD40-repeat-containing domain (InterPro IPR017986), WD40 repeat (InterPro IPR001680), WD40 YVTN repeat-like-containing domain (InterPro IPR015943), WD40 repeat, subgroup (InterPro IPR019781)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K14003        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04141        [VIEW IN KEGG]
map04141        [VIEW IN KEGG]
GOs GO:0002790        [VIEW IN EMBL-EBI]
GO:0003400        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005085        [VIEW IN EMBL-EBI]
GO:0005090        [VIEW IN EMBL-EBI]
GO:0005096        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005774        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005789        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006888        [VIEW IN EMBL-EBI]
GO:0008047        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009306        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0030176        [VIEW IN EMBL-EBI]
GO:0030234        [VIEW IN EMBL-EBI]
GO:0030695        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031227        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032386        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0032940        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0042175        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043085        [VIEW IN EMBL-EBI]
GO:0043087        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043254        [VIEW IN EMBL-EBI]
GO:0043547        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044432        [VIEW IN EMBL-EBI]
GO:0044437        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046903        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048193        [VIEW IN EMBL-EBI]
GO:0048209        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051020        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051336        [VIEW IN EMBL-EBI]
GO:0051345        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0060341        [VIEW IN EMBL-EBI]
GO:0060589        [VIEW IN EMBL-EBI]
GO:0060627        [VIEW IN EMBL-EBI]
GO:0060628        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090113        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098772        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:0098827        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGAATCAGATTCCAGAGAGCAATCAACCGTCGAATACGCAGACCTACGGCTTTCCGATCTACGCCGCCGACTGGATCCCGGAAGAAACCGTCAGATCGAAAATCGACAAGGATCAGAACAACTCCGAAGATGACGGCAGCGAGTCTTCTTCTTCTCCGTCTTCGTCGACGACCTCCCGGAGCTGCATCGTTTTGGCGGGAGGAGGCGGAGAGGGACGAAGCGGGATCGCTAACGTCGTCTTAATATGTCGTGTTGATCTCGACACCAAATCTCTCTCCGAACAACCTGTGGGTAGGATTGTGCTTGGTACTGATCTGCCTTACAGGATGGCTGTTCATCCTCGTGGAGGTGGCCTTGTTTGCGCATTGCCTAACAGTTGCAAACGGTTTGATTGGGAGAACATTATGAGTCCAAGAGAGGGTGGTGAAGAAGGAGAGGAAGTGATTAAAGAGTTGAAGGACGTTGGGCAACAGTTAGCTTTGGCGTTTAATCAGGAGGGGTCCGTGCTTGCGGCTGGTGGGGAGGATGGGACTTTGAGGATTTTTGAATGGCCTAGTATGAAAACGTTACTTGATGAGTCTAAGGCACATTCATCAGTTAAAAACCTAACTTTCAGCGAAAGTGGTAAGTTTCTTGTGTCACTTGGAGGTCCACTTTGTCGGGTTTGGGACGTAAATGCTTCTGCTGCCATTGCCAGTCTATCAAAAGAGAAGGATGAGATGTTTGCTTACTGCAGATTCTCTGTTGACAATGCAGGCAATGAAGTTCTTTACATTGCTGCAAACACTGAACGTGGTGGGAGTATTATAACATGGGATACAACAACATGGAAAAGAAGACGTTCAAAGCTTATGAAAAACTACTCTATCTCCGCCTTTAATGTCTCAGCTGATGGGACGCTTCTTGCACTTGGAAACATGGAAGGAGATGTTTTGATAATTGATTCAACAAAAATGAAGACCCACCAATTGGTCAAGAAAGCTCATCTCGGTTTGGTCACCGCACTGAGTTTCTCCCCTGATTCAAGGTGCTTAGTGTCAGTATCTTTTGACTCGAGGGCAAAGCTAACTGTCATTGAGAAAACGGCTGAAAAACATGGAGTAAACTGGCTGGTTATGTTTTTGTTGTGCGTGTTGCTATACGTGGTTTCCTATTATTTCTTGATGGCAAAGGGGATCATAGCTAAAAATTAG
Protein:  
MANQIPESNQPSNTQTYGFPIYAADWIPEETVRSKIDKDQNNSEDDGSESSSSPSSSTTSRSCIVLAGGGGEGRSGIANVVLICRVDLDTKSLSEQPVGRIVLGTDLPYRMAVHPRGGGLVCALPNSCKRFDWENIMSPREGGEEGEEVIKELKDVGQQLALAFNQEGSVLAAGGEDGTLRIFEWPSMKTLLDESKAHSSVKNLTFSESGKFLVSLGGPLCRVWDVNASAAIASLSKEKDEMFAYCRFSVDNAGNEVLYIAANTERGGSIITWDTTTWKRRRSKLMKNYSISAFNVSADGTLLALGNMEGDVLIIDSTKMKTHQLVKKAHLGLVTALSFSPDSRCLVSVSFDSRAKLTVIEKTAEKHGVNWLVMFLLCVLLYVVSYYFLMAKGIIAKN